1. Figure 1 Overview of the workflow for protein identification and in-depth proteome maps for different tissues of the Hevea rubber tree. Download

    2. Figure 2 Accumulation patterns of proteins in different tissues. Download

    3. Figure 3 Tissue-enriched and tissue-specific proteins in Hevea rubber tree. Download

    4. Figure 4 Weighted protein co-expression network analysis for the rubber tree proteome. Download

    5. Figure 5 Changed patterns of key proteins involved in rubber biosynthesis. Download

    6. Figure 6 Functional verification of key proteins for rubber biosynthesis. Download

    7. Figure S1 2-DE gels and MS identification of proteins from the 25 tissues. Download

    8. Figure S2 Part1 Detail information for MS identification of proteins from the 2-DE gels of the 25 tissues. Download

    9. Figure S2 Part2 Detail information for MS identification of proteins from the 2-DE gels of the 25 tissues. Download

    10. Figure S3 Number and abundance statistics of protein isoforms. Download

    11. Figure S4 GO analysis of enriched proteins for cellular components and molecular functions. Download

    12. Figure S5 Enrichment of gene ontology terms in each WPCNA modules. Download

    13. Figure S6 Identification of proteins and determination of DAPs from the leaves and latex from different rubber tree varieties and changes of latex proteins after ethylene stimulation. Download

    14. Figure S7 Molecular network diagram and alignment of REFSRPP family members. Download

    15. Table S1 Identification of the main proteins in the 2-DE gels of the detected 25 tissues. Download

    16. Table S2 Protein isoforms identified by MS from the 2-DE gels of the 25 tissues. Download

    17. Table S3 Shotgun results of proteins identified from the 25 tissues. Download

    18. Table S4 Quantification of the identified proteins from Shotgun experiments. Download

    19. Table S5 Principal component analysis of proteins identified from Hevea rubber tree. Download

    20. Table S6 Pairwise correlation of the identified proteins among the 25 tissues. Download

    21. Table S7 GO classification of the proteins identified from more than 50% tissues. Download

    22. Table S8 Differential proteins in the leaves from the six rubber tree varieties determined by iTRAQ. Download

    23. Table S9 Differential proteins in the latex from different rubber tree varieties determined by iTRAQ. Download

    24. Table S10 Determination of differential proteins in the latex from a high yield variety 73397 and a very low yield variety 107 upon ethylene stimulation by iTRAQ. Download

    25. Table S11 Key differential proteins involved in NRB in different modules in the latex and leaves from six rubber tree varieties. Download

    26. Table S12 Identification of NRB-related proteins in the 25 tissues of Hevea rubber tree. Download

    27. Table S13 NRB-pathway proteins for rubber-biosynthesis machinery in different rubber-rich tissues of the Hevea rubber tree. Download

    28. Table S14 All the identified REF/SRPP members and their accumulation patterns in different rubber-rich tissues. Download

    29. Table S15 Homologous analysis of all the predicted REF/SRPP members in the Hevea rubber tree and TKS genomes and NCBI database based on their amino acid sequences. Download

    30. Table S16 Newly annotated transcripts and proteins in the transcriptome. Download

    31. Table S17 Quantitative results of new latex proteins generated from the latex transcript database. Download