李姣 中国医学科学院医学信息研究所副研究员 医学信息学理论方法研究室主任 Email: li.jiao@imicams.ac.cn 电话:+86-10-52328740 |
研究与教育经历
2010年 — 2012年:美国国立卫生研究院(NIH), 美国国立医学图书馆(NLM)/美国国立生物技术信息中心(NCBI),博士后
2004年 — 2010年:清华大学,计算机科学与技术专业, 博士
2000年 — 2004年:东北大学,计算机科学与技术专业, 学士
研究方向
医学信息学,包括:医学信息距离度量理论,医学知识整合,电子病历挖掘,临床试验数据挖掘,药物基因组数据挖掘。
医学知识表示,包括:医学术语映射和归并,医学领域本体构建,基于本体的语义关系提取,语义关系推理。
医学文本挖掘,包括:医学文本检索与主题分类,命名实体识别,基于统计和自然语言理解技术的关系提取。
代表性论文
[1] Jiao Li, Si Zheng, Hongyu Kang, Zhen Hou & Qing Qian. Identifying Scientific Project-generated Data Citation from Full-text Articles: An Investigation of TCGA Data Citation, Journal of Data and Information Science, 2016, 1(2): 32-44
[2] Jiao Li, Yueping Sun, Robin J. Johnson, et al. BioCreative V CDR task corpus: a resource for chemical disease relation extraction, DATABASE (Oxford), 2016. doi: 10.1093/database/baw068
[3] Chih-Hsuan Wei, Yifan Peng, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Jiao Li, Thomas C. Wiegers and Zhiyong Lu. Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task. DATABASE (Oxford), 2016. doi: 10.1093/database/baw032
[4] Jiao Li, and Zhiyong Lu. An Integrative approach for discovery of new uses of existing drugs. CODATA Data Science Journal, 2015. 14(9), pp. 1–11,
[5] Jiao Li, Si Zheng, Bin Chen, et al., A Survey of Current Trends in Computational Drug Repositioning. Briefing in Bioinformatics, 2015. doi: 10.1093/bib/bbv020
[6] Ritu Khare, Jiao. Li, and Zhiyong Lu, LabeledIn: Cataloging labeled indications for human drugs. Journal of Biomedical Informatics, 2014. doi: 10.1016/j.jbi.2014.08.004.
[7]Jiao Liand Zhiyong Lu. Pathway-based Drug Repositioning Using Causal Inference. BMC Bioinformatics. 2013. 14(Suppl 16):S3 doi:10.1186/1471-2105-14-S16-S3.
[8] Jiao Li and Zhiyong Lu. Developing Topic-Specific Search Filters for PubMed with Click-Through Data. Methods of Information in Medicine. 2013. 52(5): 395-402
[9] Jiao Li and Zhiyong Lu. Systematic Identification of Pharmacogenomics Information from Clinical Trials. Journal of Biomedical Informatics. 2012, 45: 870-878
[10] Jiao Li and Zhiyong Lu. Automatic Identification and Normalization of Dosage Forms in Drug Monographs. BMC Medical Informatics and Decision Making. 2012, 12(9): doi:10.1186/1472-6947-12-9
[11] Hui Huang, Xiaogang Wu, Ragini Pandey, Jiao Li, Guoling Zhao, Sara Ibrahim, Jake Y. Chen. C2Maps: a network pharmacology database with comprehensive disease-gene-drug connectivity relationships. BMC Genomics 2012; 13 Suppl 6: S17.
[12] Jiao Li, Xiaoyan Zhu and Jake Y. Chen. Discovering Breast Cancer Drug Candidates from Biomedical Literature. International Journal of Data Mining and Bioinformatics, 2010. 4(3):pp. 241-255.
[13] Jiao Li, Xiaoyan Zhu, and Jake Y. Chen. Building Disease-specific Drug-Protein Connectivity Maps from Molecular Interaction Networks and PubMed Abstracts. PLoS Computational Biology, 2009. 5(7): e1000450.